i dont think it has anything to do with the vacum pump... i think your problem may lie in the blower regulator... or the blower motor itself... but most likely the regulator... it is fairly easy to get at...
click here for instructions on how to remove the blower motor
now when you remove it you will see that the regulator is on the blower motor where the power wires connect to it... this is probably your culprit... (in the above how-to i believe they refer to the regulator as the speed controller)...
or it may be that the fan itself needs to be oiled a little... sometimes this is the problem... you can power the fan motor directly with 12v to see if it is working properly... and see if it needs to be oiled... if it seems to be working well most likely it is the regulator...
Sean